3D structure

PDB id
7NSI (explore in PDB, NAKB, or RNA 3D Hub)
Description
55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.6 Å

Loop

Sequence
GAAA*UC
Length
6 nucleotides
Bulged bases
7NSI|1|BA|A|532
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7NSI_063 not in the Motif Atlas
Homologous match to IL_6PRV_002
Geometric discrepancy: 0.2519
The information below is about IL_6PRV_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NSI|1|BA|G|531
7NSI|1|BA|A|532
7NSI|1|BA|A|533
7NSI|1|BA|A|534
*
7NSI|1|BA|U|545
7NSI|1|BA|C|546

Current chains

Chain BA
16S rRNA

Nearby chains

Chain B9
Ribosomal protein
Chain BK
39S ribosomal protein L11, mitochondrial isoform a
Chain Bp
mL53
Chain Bq
39S ribosomal protein L54, mitochondrial

Coloring options:


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