IL_7NSI_085

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

AUU*ACU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_085 not in the Motif Atlas

Homologous match to IL_5J7L_326

Geometric discrepancy: 0.2773

The information below is about IL_5J7L_326

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

7NSI|1|BA|A|1080
7NSI|1|BA|U|1081
7NSI|1|BA|U|1082
*
7NSI|1|BA|A|1134
7NSI|1|BA|C|1135
7NSI|1|BA|U|1136

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B1

39S ribosomal protein L28, mitochondrial

Chain BI

39S ribosomal protein L9, mitochondrial