IL_7NSI_092
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- AUC*GGUUU
- Length
- 8 nucleotides
- Bulged bases
- 7NSI|1|BA|U|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_092 not in the Motif Atlas
- Homologous match to IL_7RQB_094
- Geometric discrepancy: 0.2443
- The information below is about IL_7RQB_094
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform; mini C-loop
- Motif group
- IL_92788.2
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
7NSI|1|BA|A|1282
7NSI|1|BA|U|1283
7NSI|1|BA|C|1284
*
7NSI|1|BA|G|1312
7NSI|1|BA|G|1313
7NSI|1|BA|U|1314
7NSI|1|BA|U|1315
7NSI|1|BA|U|1316
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BG
- Ribosome-recycling factor, mitochondrial
- Chain BJ
- 39S ribosomal protein L10, mitochondrial isoform a
- Chain BQ
- 39S ribosomal protein L16, mitochondrial
- Chain Bt
- Mitochondrial ribosomal protein L57
Coloring options: