IL_7NSI_093
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- UCUAG*CGACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_093 not in the Motif Atlas
- Homologous match to IL_5J7L_338
- Geometric discrepancy: 0.1985
- The information below is about IL_5J7L_338
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7NSI|1|BA|U|1289
7NSI|1|BA|C|1290
7NSI|1|BA|U|1291
7NSI|1|BA|A|1292
7NSI|1|BA|G|1293
*
7NSI|1|BA|C|1303
7NSI|1|BA|G|1304
7NSI|1|BA|A|1305
7NSI|1|BA|C|1306
7NSI|1|BA|A|1307
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B9
- Ribosomal protein
- Chain BQ
- 39S ribosomal protein L16, mitochondrial
- Chain Bq
- 39S ribosomal protein L54, mitochondrial
Coloring options: