IL_7NSI_100

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CCAAC*GCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_100 not in the Motif Atlas

Geometric match to IL_4JRC_003

Geometric discrepancy: 0.189

The information below is about IL_4JRC_003

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.13

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

23

Unit IDs

7NSI|1|BA|C|1483
7NSI|1|BA|C|1484
7NSI|1|BA|A|1485
7NSI|1|BA|A|1486
7NSI|1|BA|C|1487
*
7NSI|1|BA|G|1497
7NSI|1|BA|C|1498
7NSI|1|BA|G|1499

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BE

ICT1

Chain BO

uL14m

Chain BT

39S ribosomal protein L19, mitochondrial