3D structure

PDB id
7NSI (explore in PDB, NAKB, or RNA 3D Hub)
Description
55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.6 Å

Loop

Sequence
UUUUAA*UAACCAUAACA
Length
17 nucleotides
Bulged bases
7NSI|1|BA|A|1217, 7NSI|1|BA|U|1218, 7NSI|1|BA|C|1221
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NSI|1|BA|U|1186
7NSI|1|BA|U|1187
7NSI|1|BA|U|1188
7NSI|1|BA|U|1189
7NSI|1|BA|A|1190
7NSI|1|BA|A|1191
*
7NSI|1|BA|U|1212
7NSI|1|BA|A|1213
7NSI|1|BA|A|1214
7NSI|1|BA|C|1215
7NSI|1|BA|C|1216
7NSI|1|BA|A|1217
7NSI|1|BA|U|1218
7NSI|1|BA|A|1219
7NSI|1|BA|A|1220
7NSI|1|BA|C|1221
7NSI|1|BA|A|1222

Current chains

Chain BA
16S rRNA

Nearby chains

Chain B0
39S ribosomal protein L27, mitochondrial
Chain B6
39S ribosomal protein L33, mitochondrial
Chain B8
39S ribosomal protein L35, mitochondrial
Chain BS
39S ribosomal protein L18, mitochondrial isoform 1
Chain Bu
Mitochondrial ribosomal protein L58
Chain Bv
39S ribosomal protein L59, mitochondrial

Coloring options:

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