IL_7NSO_040

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGUUG*CAUCA

Length

10 nucleotides

Bulged bases

7NSO|1|A|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSO_040 not in the Motif Atlas

Homologous match to IL_5J7L_384

Geometric discrepancy: 0.3886

The information below is about IL_5J7L_384

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33835.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

7NSO|1|A|U|1058
7NSO|1|A|G|1059
7NSO|1|A|U|1060
7NSO|1|A|U|1061
7NSO|1|A|G|1062
*
7NSO|1|A|C|1076
7NSO|1|A|A|1077
7NSO|1|A|U|1078
7NSO|1|A|C|1079
7NSO|1|A|A|1080

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains