IL_7NSO_175

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSO_175 not in the Motif Atlas

Geometric match to IL_5MWI_007

Geometric discrepancy: 0.1229

The information below is about IL_5MWI_007

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

259

Unit IDs

7NSO|1|a|G|1405
7NSO|1|a|U|1406
7NSO|1|a|C|1407
*
7NSO|1|a|G|1494
7NSO|1|a|U|1495
7NSO|1|a|C|1496

Current chains

Chain a

16S rRNA (1540-MER)

Nearby chains

Chain 8

Transfer RNA; tRNA

Chain A

Large subunit ribosomal RNA; LSU rRNA