IL_7NSP_021

3D structure

PDB id

7NSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGG*CAAUC

Length

8 nucleotides

Bulged bases

7NSP|1|A|G|776, 7NSP|1|A|A|788, 7NSP|1|A|A|789

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSP_021 not in the Motif Atlas

Homologous match to IL_7A0S_021

Geometric discrepancy: 0.1263

The information below is about IL_7A0S_021

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_89509.1

Basepair signature

cWW-cWW

Number of instances in this motif group

9

Unit IDs

7NSP|1|A|G|775
7NSP|1|A|G|776
7NSP|1|A|G|777
*
7NSP|1|A|C|787
7NSP|1|A|A|788
7NSP|1|A|A|789
7NSP|1|A|U|790
7NSP|1|A|C|791

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2

Chain S

50S ribosomal protein L22