IL_7NSP_107

3D structure

PDB id

7NSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CU*AAG

Length

5 nucleotides

Bulged bases

7NSP|1|A|A|2800

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSP_107 not in the Motif Atlas

Geometric match to IL_4V9F_025

Geometric discrepancy: 0.1981

The information below is about IL_4V9F_025

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7NSP|1|A|C|2795
7NSP|1|A|U|2796
*
7NSP|1|A|A|2799
7NSP|1|A|A|2800
7NSP|1|A|G|2801

Current chains

Chain A

23S rRNA

Nearby chains