IL_7NSP_191

3D structure

PDB id

7NSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGUAGGAUAGGUGGGAGGC*GCCGACCUUGAAAUACCACCC

Length

41 nucleotides

Bulged bases

7NSP|1|A|U|2111, 7NSP|1|A|U|2118, 7NSP|1|A|A|2126, 7NSP|1|A|C|2161, 7NSP|1|A|U|2172, 7NSP|1|A|C|2175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NSP|1|A|G|2110
7NSP|1|A|U|2111
7NSP|1|A|G|2112
7NSP|1|A|U|2113
7NSP|1|A|A|2114
7NSP|1|A|G|2115
7NSP|1|A|G|2116
7NSP|1|A|A|2117
7NSP|1|A|U|2118
7NSP|1|A|A|2119
7NSP|1|A|G|2120
7NSP|1|A|G|2121
7NSP|1|A|U|2122
7NSP|1|A|G|2123
7NSP|1|A|G|2124
7NSP|1|A|G|2125
7NSP|1|A|A|2126
7NSP|1|A|G|2127
7NSP|1|A|G|2128
7NSP|1|A|C|2129
*
7NSP|1|A|G|2159
7NSP|1|A|C|2160
7NSP|1|A|C|2161
7NSP|1|A|G|2162
7NSP|1|A|A|2163
7NSP|1|A|C|2164
7NSP|1|A|C|2165
7NSP|1|A|U|2166
7NSP|1|A|U|2167
7NSP|1|A|G|2168
7NSP|1|A|A|2169
7NSP|1|A|A|2170
7NSP|1|A|A|2171
7NSP|1|A|U|2172
7NSP|1|A|A|2173
7NSP|1|A|C|2174
7NSP|1|A|C|2175
7NSP|1|A|A|2176
7NSP|1|A|C|2177
7NSP|1|A|C|2178
7NSP|1|A|C|2179

Current chains

Chain A

23S rRNA

Nearby chains