IL_7NSQ_172
3D structure
- PDB id
- 7NSQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSQ_172 not in the Motif Atlas
- Geometric match to IL_5MWI_007
- Geometric discrepancy: 0.1396
- The information below is about IL_5MWI_007
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 259
Unit IDs
7NSQ|1|a|G|1405
7NSQ|1|a|U|1406
7NSQ|1|a|C|1407
*
7NSQ|1|a|G|1494
7NSQ|1|a|U|1495
7NSQ|1|a|C|1496
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain 6
- mRNA
- Chain 8
- Transfer RNA; tRNA
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S12
- Chain v
- Transfer RNA; tRNA
Coloring options: