IL_7NWH_010

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CCGG*CGGCG

Length

9 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|C|180
7NWH|1|5|C|181
7NWH|1|5|G|182
7NWH|1|5|G|189
*
7NWH|1|5|C|252
7NWH|1|5|G|253
7NWH|1|5|G|254
7NWH|1|5|C|255
7NWH|1|5|G|256

Current chains

Chain 5

28S Ribosomal RNA

Nearby chains

Chain h

uL29

Chain j

Ribosomal protein L37