IL_7NWH_116

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAGC*GGCUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|G|4097
7NWH|1|5|A|4098
7NWH|1|5|G|4099
7NWH|1|5|C|4100
*
7NWH|1|5|G|4108
7NWH|1|5|G|4109
7NWH|1|5|C|4110
7NWH|1|5|U|4111
7NWH|1|5|C|4112

Current chains

Chain 5

28S Ribosomal RNA

Nearby chains

Chain BB

40S ribosomal protein S3a

Chain G

L7a

Chain g

60S ribosomal protein L34