IL_7NWH_167
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- UCUAAG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWH_167 not in the Motif Atlas
- Homologous match to IL_4V88_389
- Geometric discrepancy: 0.1838
- The information below is about IL_4V88_389
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61299.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
7NWH|1|9|U|57
7NWH|1|9|C|58
7NWH|1|9|U|59
7NWH|1|9|A|60
7NWH|1|9|A|61
7NWH|1|9|G|62
*
7NWH|1|9|C|86
7NWH|1|9|U|87
7NWH|1|9|G|88
Current chains
- Chain 9
- 18S Ribosomal RNA
Nearby chains
- Chain GG
- 40S ribosomal protein S6
- Chain YY
- 40S ribosomal protein S24
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