IL_7NWH_173

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

7NWH|1|9|C|142, 7NWH|1|9|U|143

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|9|G|130
7NWH|1|9|U|140
7NWH|1|9|A|141
7NWH|1|9|C|142
7NWH|1|9|U|143
7NWH|1|9|U|144
*
7NWH|1|9|A|175
7NWH|1|9|U|176
7NWH|1|9|G|177
7NWH|1|9|C|178
7NWH|1|9|C|179
7NWH|1|9|G|180
7NWH|1|9|A|181
7NWH|1|9|C|182

Current chains

Chain 9

18S Ribosomal RNA

Nearby chains

Chain GG

40S ribosomal protein S6

Chain W

60S ribosomal protein L24-like protein