IL_7NWI_039

3D structure

PDB id

7NWI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GGAAGGUG*UGUUACAGCC

Length

18 nucleotides

Bulged bases

7NWI|1|5|G|745

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWI|1|5|G|744
7NWI|1|5|G|745
7NWI|1|5|A|746
7NWI|1|5|A|747
7NWI|1|5|G|748
7NWI|1|5|G|749
7NWI|1|5|U|750
7NWI|1|5|G|751
*
7NWI|1|5|U|911
7NWI|1|5|G|912
7NWI|1|5|U|913
7NWI|1|5|U|914
7NWI|1|5|A|915
7NWI|1|5|C|916
7NWI|1|5|A|917
7NWI|1|5|G|918
7NWI|1|5|C|919
7NWI|1|5|C|920

Current chains

Chain 5

28S ribosomal RNA+BlaS

Nearby chains

Chain M

Ribosomal protein L14

Chain S

L18a