IL_7NWI_049

3D structure

PDB id

7NWI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CGGG*CCGUG

Length

9 nucleotides

Bulged bases

7NWI|1|5|G|1359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWI|1|5|C|1357
7NWI|1|5|G|1358
7NWI|1|5|G|1359
7NWI|1|5|G|1360
*
7NWI|1|5|C|1378
7NWI|1|5|C|1379
7NWI|1|5|G|1380
7NWI|1|5|U|1381
7NWI|1|5|G|1382

Current chains

Chain 5

28S ribosomal RNA+BlaS

Nearby chains

Chain C

60S ribosomal protein L4

Chain L

L13

Chain N

Ribosomal protein L15

Chain a

uL15