IL_7NWI_065
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- CUCGCACACGCAGU*AAUGG
- Length
- 19 nucleotides
- Bulged bases
- 7NWI|1|5|G|1697, 7NWI|1|5|C|1698, 7NWI|1|5|A|1699, 7NWI|1|5|C|1718, 7NWI|1|5|G|1724
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWI|1|5|C|1694
7NWI|1|5|U|1695
7NWI|1|5|C|1696
7NWI|1|5|G|1697
7NWI|1|5|C|1698
7NWI|1|5|A|1699
7NWI|1|5|C|1718
7NWI|1|5|A|1719
7NWI|1|5|C|1720
7NWI|1|5|G|1721
7NWI|1|5|C|1722
7NWI|1|5|A|1723
7NWI|1|5|G|1724
7NWI|1|5|U|1725
*
7NWI|1|5|A|1837
7NWI|1|5|A|1838
7NWI|1|5|U|1839
7NWI|1|5|G|1840
7NWI|1|5|G|1842
Current chains
- Chain 5
- 28S ribosomal RNA+BlaS
Nearby chains
- Chain F
- uL30
- Chain Q
- Ribosomal_L18e/L15P domain-containing protein
- Chain T
- eL21
- Chain b
- 60S ribosomal protein L29
Coloring options: