IL_7NWI_201

3D structure

PDB id

7NWI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

7NWI|1|9|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWI|1|9|A|599
7NWI|1|9|G|600
7NWI|1|9|G|601
7NWI|1|9|G|602
7NWI|1|9|C|603
7NWI|1|9|A|604
7NWI|1|9|A|605
7NWI|1|9|G|606
7NWI|1|9|U|607
7NWI|1|9|C|608
*
7NWI|1|9|G|635
7NWI|1|9|C|636
7NWI|1|9|U|637

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain CC

40S ribosomal protein S2

Chain DD

40S ribosomal protein S3

Chain JJ

40S ribosomal protein S9

Chain ee

40S ribosomal protein S30