IL_7NWI_243

3D structure

PDB id

7NWI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CCCCCG*CGGCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWI|1|9|C|1415
7NWI|1|9|C|1416
7NWI|1|9|C|1417
7NWI|1|9|C|1418
7NWI|1|9|C|1419
7NWI|1|9|G|1420
*
7NWI|1|9|C|1427
7NWI|1|9|G|1428
7NWI|1|9|G|1429
7NWI|1|9|C|1430
7NWI|1|9|G|1431

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain QQ

Rps16 protein

Chain TT

S19