IL_7NWI_246
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GUGCCUACC*GUAACC
- Length
- 15 nucleotides
- Bulged bases
- 7NWI|1|9|G|1552, 7NWI|1|9|C|1554, 7NWI|1|9|A|1580, 7NWI|1|9|C|1581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWI|1|9|G|1550
7NWI|1|9|U|1551
7NWI|1|9|G|1552
7NWI|1|9|C|1553
7NWI|1|9|C|1554
7NWI|1|9|U|1555
7NWI|1|9|A|1556
7NWI|1|9|C|1557
7NWI|1|9|C|1558
*
7NWI|1|9|G|1577
7NWI|1|9|U|1578
7NWI|1|9|A|1579
7NWI|1|9|A|1580
7NWI|1|9|C|1581
7NWI|1|9|C|1582
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain DD
- 40S ribosomal protein S3
- Chain KK
- S10_plectin domain-containing protein
- Chain UU
- Ribosomal_S10 domain-containing protein
- Chain dd
- ribosomal protein uS14
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