IL_7NWI_271
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGGGGCGGCGCGCGCGCG*CCCCCGGAGCCCCGCGGACGCUACG
- Length
- 67 nucleotides
- Bulged bases
- 7NWI|1|5|G|2096, 7NWI|1|5|G|2106, 7NWI|1|5|G|2111, 7NWI|1|5|G|2113, 7NWI|1|5|G|2114, 7NWI|1|5|C|2123, 7NWI|1|5|G|2124, 7NWI|1|5|G|2251, 7NWI|1|5|A|2253, 7NWI|1|5|G|2254, 7NWI|1|5|G|2259, 7NWI|1|5|C|2264, 7NWI|1|5|C|2266, 7NWI|1|5|U|2267, 7NWI|1|5|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWI|1|5|C|2087
7NWI|1|5|A|2088
7NWI|1|5|G|2089
7NWI|1|5|U|2090
7NWI|1|5|C|2091
7NWI|1|5|G|2092
7NWI|1|5|A|2093
7NWI|1|5|G|2094
7NWI|1|5|A|2095
7NWI|1|5|G|2096
7NWI|1|5|U|2097
7NWI|1|5|G|2098
7NWI|1|5|G|2099
7NWI|1|5|A|2100
7NWI|1|5|C|2101
7NWI|1|5|G|2102
7NWI|1|5|G|2103
7NWI|1|5|G|2104
7NWI|1|5|A|2105
7NWI|1|5|G|2106
7NWI|1|5|C|2107
7NWI|1|5|G|2108
7NWI|1|5|G|2109
7NWI|1|5|C|2110
7NWI|1|5|G|2111
7NWI|1|5|G|2112
7NWI|1|5|G|2113
7NWI|1|5|G|2114
7NWI|1|5|G|2115
7NWI|1|5|C|2116
7NWI|1|5|G|2117
7NWI|1|5|G|2118
7NWI|1|5|C|2119
7NWI|1|5|G|2120
7NWI|1|5|C|2121
7NWI|1|5|G|2122
7NWI|1|5|C|2123
7NWI|1|5|G|2124
7NWI|1|5|C|2125
7NWI|1|5|G|2126
7NWI|1|5|C|2127
7NWI|1|5|G|2128
*
7NWI|1|5|C|2246
7NWI|1|5|C|2247
7NWI|1|5|C|2248
7NWI|1|5|C|2249
7NWI|1|5|C|2250
7NWI|1|5|G|2251
7NWI|1|5|G|2252
7NWI|1|5|A|2253
7NWI|1|5|G|2254
7NWI|1|5|C|2255
7NWI|1|5|C|2256
7NWI|1|5|C|2257
7NWI|1|5|C|2258
7NWI|1|5|G|2259
7NWI|1|5|C|2260
7NWI|1|5|G|2261
7NWI|1|5|G|2262
7NWI|1|5|A|2263
7NWI|1|5|C|2264
7NWI|1|5|G|2265
7NWI|1|5|C|2266
7NWI|1|5|U|2267
7NWI|1|5|A|2268
7NWI|1|5|C|2269
7NWI|1|5|G|2270
Current chains
- Chain 5
- 28S ribosomal RNA+BlaS
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
- Chain Q
- Ribosomal_L18e/L15P domain-containing protein
- Chain r
- eL28
Coloring options: