IL_7NWI_275
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GCCUCGGAUAG*UGCGGAGUGC
- Length
- 21 nucleotides
- Bulged bases
- 7NWI|1|5|C|4756, 7NWI|1|5|C|4757, 7NWI|1|5|U|4763, 7NWI|1|5|C|4871, 7NWI|1|5|G|4872, 7NWI|1|5|A|4874, 7NWI|1|5|G|4877
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWI|1|5|G|4755
7NWI|1|5|C|4756
7NWI|1|5|C|4757
7NWI|1|5|U|4758
7NWI|1|5|C|4759
7NWI|1|5|G|4760
7NWI|1|5|G|4761
7NWI|1|5|A|4762
7NWI|1|5|U|4763
7NWI|1|5|A|4764
7NWI|1|5|G|4765
*
7NWI|1|5|U|4869
7NWI|1|5|G|4870
7NWI|1|5|C|4871
7NWI|1|5|G|4872
7NWI|1|5|G|4873
7NWI|1|5|A|4874
7NWI|1|5|G|4875
7NWI|1|5|U|4876
7NWI|1|5|G|4877
7NWI|1|5|C|4878
Current chains
- Chain 5
- 28S ribosomal RNA+BlaS
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain H
- L9
- Chain M
- Ribosomal protein L14
- Chain O
- L13a
- Chain S
- L18a
Coloring options: