IL_7NWI_284
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GACAGGAUUGACAG*CUUUCUCGAUUC
- Length
- 26 nucleotides
- Bulged bases
- 7NWI|1|9|C|1283, 7NWI|1|9|A|1284, 7NWI|1|9|G|1285, 7NWI|1|9|G|1286, 7NWI|1|9|C|1292
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWI|1|9|G|1281
7NWI|1|9|A|1282
7NWI|1|9|C|1283
7NWI|1|9|A|1284
7NWI|1|9|G|1285
7NWI|1|9|G|1286
7NWI|1|9|A|1287
7NWI|1|9|U|1288
7NWI|1|9|U|1289
7NWI|1|9|G|1290
7NWI|1|9|A|1291
7NWI|1|9|C|1292
7NWI|1|9|A|1293
7NWI|1|9|G|1294
*
7NWI|1|9|C|1305
7NWI|1|9|U|1306
7NWI|1|9|U|1307
7NWI|1|9|U|1308
7NWI|1|9|C|1309
7NWI|1|9|U|1310
7NWI|1|9|C|1311
7NWI|1|9|G|1312
7NWI|1|9|A|1313
7NWI|1|9|U|1314
7NWI|1|9|U|1315
7NWI|1|9|C|1316
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain KK
- S10_plectin domain-containing protein
- Chain MM
- 40S ribosomal protein S12
- Chain PP
- 40S ribosomal protein uS19
- Chain dd
- ribosomal protein uS14
- Chain ff
- S27a
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