IL_7NWT_041

3D structure

PDB id

7NWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GAAA*UC

Length

6 nucleotides

Bulged bases

7NWT|1|1|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NWT_041 not in the Motif Atlas

Homologous match to IL_6PRV_002

Geometric discrepancy: 0.3223

The information below is about IL_6PRV_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWT|1|1|G|1087
7NWT|1|1|A|1088
7NWT|1|1|A|1089
7NWT|1|1|A|1090
*
7NWT|1|1|U|1101
7NWT|1|1|C|1102

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain I

50S ribosomal protein L11

Chain f

50S ribosomal protein L36