IL_7NWT_148

3D structure

PDB id

7NWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

7NWT|1|2|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NWT_148 not in the Motif Atlas

Homologous match to IL_5J7L_040

Geometric discrepancy: 0.0745

The information below is about IL_5J7L_040

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

7NWT|1|2|G|925
7NWT|1|2|G|926
7NWT|1|2|G|927
*
7NWT|1|2|U|1390
7NWT|1|2|U|1391

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain XX

mRNA