IL_7NWT_185

3D structure

PDB id

7NWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GUGUAGGAUAGGUGGGAGGC*GCCGACCUUGAAAUACCACCC

Length

41 nucleotides

Bulged bases

7NWT|1|1|U|2111, 7NWT|1|1|A|2114, 7NWT|1|1|G|2115, 7NWT|1|1|U|2118, 7NWT|1|1|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWT|1|1|G|2110
7NWT|1|1|U|2111
7NWT|1|1|G|2112
7NWT|1|1|U|2113
7NWT|1|1|A|2114
7NWT|1|1|G|2115
7NWT|1|1|G|2116
7NWT|1|1|A|2117
7NWT|1|1|U|2118
7NWT|1|1|A|2119
7NWT|1|1|G|2120
7NWT|1|1|G|2121
7NWT|1|1|U|2122
7NWT|1|1|G|2123
7NWT|1|1|G|2124
7NWT|1|1|G|2125
7NWT|1|1|A|2126
7NWT|1|1|G|2127
7NWT|1|1|G|2128
7NWT|1|1|C|2129
*
7NWT|1|1|G|2159
7NWT|1|1|C|2160
7NWT|1|1|C|2161
7NWT|1|1|G|2162
7NWT|1|1|A|2163
7NWT|1|1|C|2164
7NWT|1|1|C|2165
7NWT|1|1|U|2166
7NWT|1|1|U|2167
7NWT|1|1|G|2168
7NWT|1|1|A|2169
7NWT|1|1|A|2170
7NWT|1|1|A|2171
7NWT|1|1|U|2172
7NWT|1|1|A|2173
7NWT|1|1|C|2174
7NWT|1|1|C|2175
7NWT|1|1|A|2176
7NWT|1|1|C|2177
7NWT|1|1|C|2178
7NWT|1|1|C|2179

Current chains

Chain 1

23S ribosomal RNA

Nearby chains