IL_7NWW_165

3D structure

PDB id

7NWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUGC*GAGGAAG

Length

11 nucleotides

Bulged bases

7NWW|1|2|U|1159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NWW_165 not in the Motif Atlas

Geometric match to IL_5J7L_053

Geometric discrepancy: 0.1237

The information below is about IL_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42032.1

Basepair signature

cWW-cSH-cWW-tWH-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7NWW|1|2|C|1158
7NWW|1|2|U|1159
7NWW|1|2|G|1160
7NWW|1|2|C|1161
*
7NWW|1|2|G|1175
7NWW|1|2|A|1176
7NWW|1|2|G|1177
7NWW|1|2|G|1178
7NWW|1|2|A|1179
7NWW|1|2|A|1180
7NWW|1|2|G|1181

Current chains

Chain 2

16S rRNA

Nearby chains

Chain f

30S ribosomal protein S2

Chain m

30S ribosomal protein S9