IL_7O1A_010

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUGCC*GAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_010 not in the Motif Atlas

Homologous match to IL_5J7L_010

Geometric discrepancy: 0.0863

The information below is about IL_5J7L_010

Detailed Annotation

Minor groove platform related

Broad Annotation

Minor groove platform related

Motif group

IL_64231.5

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

11

Unit IDs

7O1A|1|AA|C|132
7O1A|1|AA|U|133
7O1A|1|AA|G|134
7O1A|1|AA|C|135
7O1A|1|AA|C|136
*
7O1A|1|AA|G|227
7O1A|1|AA|A|228
7O1A|1|AA|U|229
7O1A|1|AA|G|230

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20