IL_7O1A_058

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_058 not in the Motif Atlas

Homologous match to IL_5J7L_057

Geometric discrepancy: 0.0856

The information below is about IL_5J7L_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7O1A|1|AA|C|1303
7O1A|1|AA|G|1304
7O1A|1|AA|G|1305
7O1A|1|AA|A|1306
7O1A|1|AA|U|1307
7O1A|1|AA|U|1308
*
7O1A|1|AA|A|1329
7O1A|1|AA|U|1330
7O1A|1|AA|G|1331
7O1A|1|AA|A|1332
7O1A|1|AA|A|1333
7O1A|1|AA|G|1334

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AM

30S ribosomal protein S13