3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
GAC*GC
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1A_086 not in the Motif Atlas
Homologous match to IL_5J7L_264
Geometric discrepancy: 0.0757
The information below is about IL_5J7L_264
Detailed Annotation
Major groove platform
Broad Annotation
No text annotation
Motif group
IL_48076.6
Basepair signature
cWW-cSH-cWW
Number of instances in this motif group
41

Unit IDs

7O1A|1|BA|G|738
7O1A|1|BA|A|739
7O1A|1|BA|C|740
*
7O1A|1|BA|G|757
7O1A|1|BA|C|758

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

No other chains within 10Å

Coloring options:


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