IL_7O1A_126

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAGAAC*GAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_126 not in the Motif Atlas

Homologous match to IL_5J7L_304

Geometric discrepancy: 0.0543

The information below is about IL_5J7L_304

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.4

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7O1A|1|BA|G|1651
7O1A|1|BA|A|1652
7O1A|1|BA|G|1653
7O1A|1|BA|A|1654
7O1A|1|BA|A|1655
7O1A|1|BA|C|1656
*
7O1A|1|BA|G|2004
7O1A|1|BA|A|2005
7O1A|1|BA|C|2006

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BN

50S ribosomal protein L17