3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGUAAC*GGAGAAG
Length
13 nucleotides
Bulged bases
7O1A|1|BA|G|1699
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1A_130 not in the Motif Atlas
Homologous match to IL_5J7L_308
Geometric discrepancy: 0.0668
The information below is about IL_5J7L_308
Detailed Annotation
tSH-tSH-tHH-tHS
Broad Annotation
No text annotation
Motif group
IL_47346.2
Basepair signature
cWW-tSH-L-R-tHH-tHS-cWW
Number of instances in this motif group
7

Unit IDs

7O1A|1|BA|C|1686
7O1A|1|BA|G|1687
7O1A|1|BA|U|1688
7O1A|1|BA|A|1689
7O1A|1|BA|A|1690
7O1A|1|BA|C|1691
*
7O1A|1|BA|G|1696
7O1A|1|BA|G|1697
7O1A|1|BA|A|1698
7O1A|1|BA|G|1699
7O1A|1|BA|A|1700
7O1A|1|BA|A|1701
7O1A|1|BA|G|1702

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain AA
Small subunit ribosomal RNA; SSU rRNA
Chain BC
50S ribosomal protein L2

Coloring options:


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