IL_7O1A_131

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAUGUAG*UGAAA

Length

12 nucleotides

Bulged bases

7O1A|1|BA|U|1714

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_131 not in the Motif Atlas

Homologous match to IL_5J7L_309

Geometric discrepancy: 0.1024

The information below is about IL_5J7L_309

Detailed Annotation

6x5 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_88269.4

Basepair signature

cWW-tWW-cSH-tWH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7O1A|1|BA|U|1712
7O1A|1|BA|A|1713
7O1A|1|BA|U|1714
7O1A|1|BA|G|1715
7O1A|1|BA|U|1716
7O1A|1|BA|A|1717
7O1A|1|BA|G|1718
*
7O1A|1|BA|U|1742
7O1A|1|BA|G|1743
7O1A|1|BA|A|1744
7O1A|1|BA|A|1745
7O1A|1|BA|A|1746

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains