3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
GC*GCAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1A_140 not in the Motif Atlas
Homologous match to IL_7RQB_076
Geometric discrepancy: 0.0652
The information below is about IL_7RQB_076
Detailed Annotation
Bulged stacked bases
Broad Annotation
Bulged stacked bases
Motif group
IL_59677.2
Basepair signature
cWW-cWW
Number of instances in this motif group
19

Unit IDs

7O1A|1|BA|G|1933
7O1A|1|BA|C|1934
*
7O1A|1|BA|G|1964
7O1A|1|BA|C|1965
7O1A|1|BA|A|1966
7O1A|1|BA|C|1967

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain B8
Transfer RNA; tRNA

Coloring options:


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