IL_7O1A_184

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

ACC*GGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_184 not in the Motif Atlas

Geometric match to IL_4KQ0_003

Geometric discrepancy: 0.1343

The information below is about IL_4KQ0_003

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.6

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

7O1A|1|AA|A|502
7O1A|1|AA|C|503
7O1A|1|AA|C|504
*
7O1A|1|AA|G|541
7O1A|1|AA|G|542
7O1A|1|AA|U|543

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AL

30S ribosomal protein S12