IL_7O1C_042

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

7O1C|1|AA|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1C_042 not in the Motif Atlas

Homologous match to IL_4LFB_035

Geometric discrepancy: 0.0888

The information below is about IL_4LFB_035

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7O1C|1|AA|G|922
7O1C|1|AA|A|923
*
7O1C|1|AA|U|1393
7O1C|1|AA|A|1394
7O1C|1|AA|C|1395

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AE

30S ribosomal protein S5