3D structure

PDB id
7O1C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
GAAC*GAGUGAAAAAGAAC
Length
18 nucleotides
Bulged bases
7O1C|1|BA|A|504, 7O1C|1|BA|A|508
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1C_079 not in the Motif Atlas
Geometric match to IL_5J7L_255
Geometric discrepancy: 0.0653
The information below is about IL_5J7L_255
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_81516.2
Basepair signature
cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
Number of instances in this motif group
6

Unit IDs

7O1C|1|BA|G|481
7O1C|1|BA|A|482
7O1C|1|BA|A|483
7O1C|1|BA|C|484
*
7O1C|1|BA|G|496
7O1C|1|BA|A|497
7O1C|1|BA|G|498
7O1C|1|BA|U|499
7O1C|1|BA|G|500
7O1C|1|BA|A|501
7O1C|1|BA|A|502
7O1C|1|BA|A|503
7O1C|1|BA|A|504
7O1C|1|BA|A|505
7O1C|1|BA|G|506
7O1C|1|BA|A|507
7O1C|1|BA|A|508
7O1C|1|BA|C|509

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain BS
50S ribosomal protein L22
Chain BU
50S ribosomal protein L24

Coloring options:


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