IL_7O1C_111

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

7O1C|1|BA|A|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1C_111 not in the Motif Atlas

Homologous match to IL_5J7L_287

Geometric discrepancy: 0.1063

The information below is about IL_5J7L_287

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_91920.1

Basepair signature

cWW-cWW-tHH-cWW

Number of instances in this motif group

1

Unit IDs

7O1C|1|BA|G|1202
7O1C|1|BA|U|1203
7O1C|1|BA|A|1204
7O1C|1|BA|A|1205
7O1C|1|BA|G|1206
*
7O1C|1|BA|U|1240
7O1C|1|BA|A|1241
7O1C|1|BA|U|1242
7O1C|1|BA|C|1243

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15