3D structure

PDB id
7O1C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
GC*GUC
Length
5 nucleotides
Bulged bases
7O1C|1|BA|U|1460
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1C_122 not in the Motif Atlas
Homologous match to IL_5J7L_298
Geometric discrepancy: 0.1363
The information below is about IL_5J7L_298
Detailed Annotation
Single bulged U
Broad Annotation
No text annotation
Motif group
IL_89505.4
Basepair signature
cWW-L-cWW
Number of instances in this motif group
117

Unit IDs

7O1C|1|BA|G|1450
7O1C|1|BA|C|1451
*
7O1C|1|BA|G|1459
7O1C|1|BA|U|1460
7O1C|1|BA|C|1461

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

No other chains within 10Å

Coloring options:


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