3D structure

PDB id
7O1C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
ACUAGG*CUGU
Length
10 nucleotides
Bulged bases
7O1C|1|BA|G|1992
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1C_131 not in the Motif Atlas
Homologous match to IL_4WF9_065
Geometric discrepancy: 0.0812
The information below is about IL_4WF9_065
Detailed Annotation
Intercalated tWH
Broad Annotation
Intercalated tWH
Motif group
IL_76758.2
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
7

Unit IDs

7O1C|1|BA|A|1669
7O1C|1|BA|C|1670
7O1C|1|BA|U|1671
7O1C|1|BA|A|1672
7O1C|1|BA|G|1673
7O1C|1|BA|G|1674
*
7O1C|1|BA|C|1990
7O1C|1|BA|U|1991
7O1C|1|BA|G|1992
7O1C|1|BA|U|1993

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain BD
50S ribosomal protein L3
Chain BK
50S ribosomal protein L14

Coloring options:


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