IL_7O1C_180

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1C_180 not in the Motif Atlas

Homologous match to IL_5J7L_354

Geometric discrepancy: 0.0751

The information below is about IL_5J7L_354

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

7O1C|1|BA|U|2847
7O1C|1|BA|G|2848
7O1C|1|BA|U|2849
7O1C|1|BA|A|2850
7O1C|1|BA|A|2851
7O1C|1|BA|G|2852
*
7O1C|1|BA|U|2865
7O1C|1|BA|U|2866
7O1C|1|BA|G|2867
7O1C|1|BA|A|2868
7O1C|1|BA|G|2869

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BN

50S ribosomal protein L17

Chain BP

50S ribosomal protein L19