IL_7O5B_020

3D structure

PDB id

7O5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GAACAAG*CCUUGAC

Length

14 nucleotides

Bulged bases

7O5B|1|A|C|487

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O5B|1|A|G|458
7O5B|1|A|A|459
7O5B|1|A|A|460
7O5B|1|A|C|461
7O5B|1|A|A|462
7O5B|1|A|A|463
7O5B|1|A|G|464
*
7O5B|1|A|C|486
7O5B|1|A|C|487
7O5B|1|A|U|488
7O5B|1|A|U|489
7O5B|1|A|G|490
7O5B|1|A|A|491
7O5B|1|A|C|492

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain P

30S ribosomal protein S16