IL_7O5B_027

3D structure

PDB id

7O5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GUGAAAGCC*GAGGGUC

Length

16 nucleotides

Bulged bases

7O5B|1|A|U|642

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O5B|1|A|G|613
7O5B|1|A|U|614
7O5B|1|A|G|615
7O5B|1|A|A|616
7O5B|1|A|A|617
7O5B|1|A|A|618
7O5B|1|A|G|619
7O5B|1|A|C|620
7O5B|1|A|C|621
*
7O5B|1|A|G|637
7O5B|1|A|A|638
7O5B|1|A|G|639
7O5B|1|A|G|640
7O5B|1|A|G|641
7O5B|1|A|U|642
7O5B|1|A|C|643

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain D

30S ribosomal protein S4

Chain H

30S ribosomal protein S8

Chain P

30S ribosomal protein S16

Chain Q

30S ribosomal protein S17