IL_7O5B_170

3D structure

PDB id

7O5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GUUGGUAC*GUAUUGACC

Length

17 nucleotides

Bulged bases

7O5B|1|X|U|2131

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O5B|1|X|G|2126
7O5B|1|X|U|2127
7O5B|1|X|U|2128
7O5B|1|X|G|2129
7O5B|1|X|G|2130
7O5B|1|X|U|2131
7O5B|1|X|A|2132
7O5B|1|X|C|2133
*
7O5B|1|X|G|2214
7O5B|1|X|U|2215
7O5B|1|X|A|2216
7O5B|1|X|U|2217
7O5B|1|X|U|2218
7O5B|1|X|G|2219
7O5B|1|X|A|2220
7O5B|1|X|C|2221
7O5B|1|X|C|2222

Current chains

Chain X

23S rRNA (2887-MER)

Nearby chains

Chain Z

50S ribosomal protein L2