IL_7O5B_180
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_180 not in the Motif Atlas
- Homologous match to IL_4WF9_093
- Geometric discrepancy: 0.1647
- The information below is about IL_4WF9_093
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.3
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
7O5B|1|X|C|2495
7O5B|1|X|C|2496
7O5B|1|X|A|2497
7O5B|1|X|A|2498
7O5B|1|X|G|2499
*
7O5B|1|X|C|2509
7O5B|1|X|G|2510
7O5B|1|X|A|2511
7O5B|1|X|C|2512
7O5B|1|X|G|2513
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain j
- 50S ribosomal protein L16
Coloring options: