IL_7O5B_194
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- UGGAAG*UGGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_194 not in the Motif Atlas
- Homologous match to IL_4WF9_108
- Geometric discrepancy: 0.1158
- The information below is about IL_4WF9_108
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.2
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
7O5B|1|X|U|2872
7O5B|1|X|G|2873
7O5B|1|X|G|2874
7O5B|1|X|A|2875
7O5B|1|X|A|2876
7O5B|1|X|G|2877
*
7O5B|1|X|U|2890
7O5B|1|X|G|2891
7O5B|1|X|G|2892
7O5B|1|X|A|2893
7O5B|1|X|G|2894
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain k
- 50S ribosomal protein L17
- Chain m
- 50S ribosomal protein L19
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