3D structure

PDB id
7O9K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
AAA*UCU
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O9K_024 not in the Motif Atlas
Homologous match to IL_4WF9_063
Geometric discrepancy: 0.1422
The information below is about IL_4WF9_063
Detailed Annotation
Isolated tWW turn
Broad Annotation
No text annotation
Motif group
IL_10432.1
Basepair signature
cWW-tWW-cWW
Number of instances in this motif group
10

Unit IDs

7O9K|1|A|A|2467
7O9K|1|A|A|2468
7O9K|1|A|A|2469
*
7O9K|1|A|U|2658
7O9K|1|A|C|2659
7O9K|1|A|U|2660

Current chains

Chain A
16S rRNA

Nearby chains

Chain C
Mitochondrial ribosome-associated GTPase 1
Chain E
39S ribosomal protein L3, mitochondrial
Chain L
39S ribosomal protein L14, mitochondrial
Chain Q
39S ribosomal protein L19, mitochondrial

Coloring options:


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