IL_7O9K_043
3D structure
- PDB id
- 7O9K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 7O9K|1|A|A|3089
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O9K_043 not in the Motif Atlas
- Homologous match to IL_7RQB_101
- Geometric discrepancy: 0.5894
- The information below is about IL_7RQB_101
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
7O9K|1|A|C|3078
7O9K|1|A|G|3079
*
7O9K|1|A|C|3088
7O9K|1|A|A|3089
7O9K|1|A|G|3090
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain A1
- 5-methylcytosine rRNA methyltransferase NSUN4
- Chain A2
- Transcription termination factor 4, mitochondrial
- Chain G
- Mitochondrial ribosome-associated GTPase 2
- Chain n
- rRNA methyltransferase 2, mitochondrial
Coloring options: